Low-level Neuron Segmentation in Sub-Micron Resolution Images of the Complete Mouse Brain

Here, we convert point-based neuron traces to neuron segmentation masks, then implement a multi-layer perceptron model that performs well in the task of neuron segmentation.

See poster. 

Investigating Neuron Trajectories with Splines

Many neuron traces are stored as points in space, with edges connecting them and thus neuron geometry is reduced to a piecewise linear structure. In this work, we consider the points as a sampling of a continuous curve that we approximate with b-splines.

See poster.

See related code.